ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ygsC2 - ECOD Domain | ECOD

ECOD/Domains/e5ygsC2

e5ygsC2

UID: 002407737

PDB

Range: C:360-457
PDB: 5YGS chain C(all domains)
UniProt: Q93038 (all domains)
Gene: TNFRSF25

Molecule: Human TNRSF25 death domain

3D Structure

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Related Domains

Browse other domains in Death →

Classification

AArchitecturealpha arrays(a.6)

XX-groupDEATH domain(110)

HH-groupDEATH domain(110.1)

TT-groupDEATH domain(110.1.1)

FFamilyDeath(110.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Death domain

ClanCL0041Death

External Links

ECOD PDB View: 5YGS RCSB PDB: 5YGS PDBe: 5YGS UniProt: Q93038

Downloads

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