ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yi6C1 - ECOD Domain | ECOD

ECOD/Domains/e5yi6C1

e5yi6C1

UID: 002407751

PDB

Range: C:2-122
PDB: 5YI6 chain C(all domains)
UniProt: Q57820 (all domains)
Gene: cas6a

Molecule: CRISPR-associated endoribonuclease Cas6 1 (EC 3.1.-.-)

3D Structure

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Related Domains

Browse other domains in Cas6_I-A →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51)

TT-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51.1)

FFamilyCas6_I-A(304.51.1.13)

Pfam Families

PF21350Cas6_I-A

CRISPR-associated protein Cas6, N-terminal

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 5YI6 RCSB PDB: 5YI6 PDBe: 5YI6 UniProt: Q57820

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