ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ynvB1 - ECOD Domain | ECOD

ECOD/Domains/e5ynvB1

e5ynvB1

UID: 002407812

PDB

Range: B:-4-308
PDB: 5YNV chain B(all domains)
UniProt: V5TDY7 (all domains)
Gene: ambP3

Molecule: aromatic prenyltransferase

3D Structure

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Related Domains

Browse other domains in PTase_Orf2 →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupPrenyltransferase-like(4194)

HH-groupPrenyltransferase-like(4194.1)

TT-groupPrenyltransferase-like(4194.1.1)

FFamilyPTase_Orf2(4194.1.1.1)

Ligands

in contact, ≤ 4 Å

Dimethylallyl S-ThiolodiphosphateDST
drugDrugBank DB02270

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF11468PTase_Orf2

Aromatic prenyltransferase Orf2

External Links

ECOD PDB View: 5YNV RCSB PDB: 5YNV PDBe: 5YNV UniProt: V5TDY7

Downloads

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