ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yp7A1 - ECOD Domain | ECOD

ECOD/Domains/e5yp7A1

e5yp7A1

UID: 002407817

PDB

Range: A:126-169
PDB: 5YP7 chain A(all domains)
UniProt: Q13501 (all domains)
Gene: SQSTM1

Molecule: Sequestosome-1 (EBI3-associated protein of 60 kDa) (EBIAP) (p60) (Phosphotyrosine-independent ligand for the Lck SH2 domain of 62 kDa) (Ubiquitin-binding protein p62) (p62)

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyZZ(376.1.1.3)

Pfam Families

Zinc finger, ZZ type

ClanCL0229RING

External Links

ECOD PDB View: 5YP7 RCSB PDB: 5YP7 PDBe: 5YP7 UniProt: Q13501

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