ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ypbD1 - ECOD Domain | ECOD

ECOD/Domains/e5ypbD1

e5ypbD1

UID: 002407825

PDB

Range: D:2-45
PDB: 5YPB chain D(all domains)
UniProt: Q13501 (all domains)
Gene: SQSTM1

Molecule: Sequestosome-1 (EBI3-associated protein of 60 kDa) (EBIAP) (p60) (Phosphotyrosine-independent ligand for the Lck SH2 domain of 62 kDa) (Ubiquitin-binding protein p62) (p62)

3D Structure

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Related Domains

Browse other domains in ZZ →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyZZ(376.1.1.3)

Pfam Families

Zinc finger, ZZ type

ClanCL0229RING

External Links

ECOD PDB View: 5YPB RCSB PDB: 5YPB PDBe: 5YPB UniProt: Q13501

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