ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ypfB1 - ECOD Domain | ECOD

ECOD/Domains/e5ypfB1

e5ypfB1

UID: 002407835

PDB

Range: B:-3-45
PDB: 5YPF chain B(all domains)
UniProt: Q13501 (all domains)
Gene: SQSTM1

Molecule: Sequestosome-1 (EBI3-associated protein of 60 kDa) (EBIAP) (p60) (Phosphotyrosine-independent ligand for the Lck SH2 domain of 62 kDa) (Ubiquitin-binding protein p62) (p62)

3D Structure

Loading viewer...

Related Domains

Browse other domains in ZZ →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyZZ(376.1.1.3)

Pfam Families

Zinc finger, ZZ type

ClanCL0229RING

External Links

ECOD PDB View: 5YPF RCSB PDB: 5YPF PDBe: 5YPF UniProt: Q13501

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure