ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2bh2A1 - ECOD Domain | ECOD

ECOD/Domains/e2bh2A1

e2bh2A1

UID: 000024079

PDB

Range: A:15-74
PDB: 2BH2 chain A(all domains)
UniProt: P55135 (all domains)
Gene: rlmD

Molecule: 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD (EC 2.1.1.190) (23S rRNA(m5U1939)-methyltransferase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TRAM →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyTRAM(2.1.1.18)

Pfam Families

TRAM domain

ClanCL0021OB

External Links

ECOD PDB View: 2BH2 RCSB PDB: 2BH2 PDBe: 2BH2 UniProt: P55135

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure