ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5z3qB1 - ECOD Domain | ECOD

ECOD/Domains/e5z3qB1

e5z3qB1

UID: 002408162

PDB

Range: B:117-329
PDB: 5Z3Q chain B(all domains)
UniProt: P03300 (all domains)

Molecule: PV-2C

3D Structure

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Related Domains

Browse other domains in RNA_helicase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRNA_helicase(2004.1.1.55)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00910RNA_helicase

RNA helicase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5Z3Q RCSB PDB: 5Z3Q PDBe: 5Z3Q UniProt: P03300

Downloads

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