ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5z5851 - ECOD Domain | ECOD

ECOD/Domains/e5z5851

e5z5851

UID: 002408281

PDB

Range: 5:12-119
PDB: 5Z58 chain 5(all domains)
UniProt: Q9Y3B4 (all domains)
Gene: SF3B6

Molecule: Splicing factor 3B subunit 6 (Pre-mRNA branch site protein p14) (SF3b 14 kDa subunit) (SF3B14a) (Spliceosome-associated protein, 14-kDa) (Splicing factor 3b, subunit 6, 14kDa)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_1(304.9.1.1)

Pfam Families

RNA recognition motif

ClanCL0221RRM

External Links

ECOD PDB View: 5Z58 RCSB PDB: 5Z58 PDBe: 5Z58 UniProt: Q9Y3B4

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