ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5z85V1 - ECOD Domain | ECOD

ECOD/Domains/e5z85V1

e5z85V1

UID: 002408370

PDB

Range: V:1-73
PDB: 5Z85 chain V(all domains)
UniProt: P04038 (all domains)
Gene: COX6C

Molecule: Cytochrome c oxidase subunit 6C

3D Structure

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Related Domains

Browse other domains in COX6C →

Classification

AArchitectureextended segments(a.20)

XX-groupMitochondrial cytochrome c oxidase subunit VIc(5005)

HH-groupMitochondrial cytochrome c oxidase subunit VIc(5005.1)

TT-groupMitochondrial cytochrome c oxidase subunit VIc(5005.1.1)

FFamilyCOX6C(5005.1.1.1)

Ligands

in contact, ≤ 4 Å

(7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDEPSC
TristearoylglycerolTGL

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

Cytochrome c oxidase subunit VIc

External Links

ECOD PDB View: 5Z85 RCSB PDB: 5Z85 PDBe: 5Z85 UniProt: P04038

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.