ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5zh4B1 - ECOD Domain | ECOD

ECOD/Domains/e5zh4B1

e5zh4B1

UID: 002408734

PDB

Range: B:77-223
PDB: 5ZH4 chain B(all domains)
UniProt: W7JP72 (all domains)
Gene: PFNF54_04763

Molecule: Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in tRNA_anti-codon →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilytRNA_anti-codon(2.1.1.15)

Pfam Families

PF01336tRNA_anti-codon

OB-fold nucleic acid binding domain

ClanCL0021OB

External Links

ECOD PDB View: 5ZH4 RCSB PDB: 5ZH4 PDBe: 5ZH4 UniProt: W7JP72

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure