ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6djzB2 - ECOD Domain | ECOD

ECOD/Domains/e6djzB2

e6djzB2

UID: 002409372

PDB

Range: B:34-219
PDB: 6DJZ chain B(all domains)
UniProt: Q99720 (all domains)
Gene: SIGMAR1

Molecule: Sigma non-opioid intracellular receptor 1

3D Structure

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Related Domains

Browse other domains in ERG2_Sigma1R →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyERG2_Sigma1R(10.12.1.21)

Ligands

in contact, ≤ 4 Å

HaloperidolGMJ
drugDrugBank DB00502

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF04622ERG2_Sigma1R

ERG2 and Sigma1 receptor like protein

ClanCL0029Cupin

External Links

ECOD PDB View: 6DJZ RCSB PDB: 6DJZ PDBe: 6DJZ UniProt: Q99720

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.