ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6ef3r2 - ECOD Domain | ECOD

ECOD/Domains/e6ef3r2

e6ef3r2

UID: 002409431

PDB

Range: r:22-205
PDB: 6EF3 chain r(all domains)
UniProt: P43588 (all domains)
Gene: RPN11

Molecule: Ubiquitin C-terminal hydrolase RPN11 (EC 3.4.19.12) (26S proteasome regulatory subunit RPN11) (Protein MPR1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in JAB →

Classification

AArchitecturea+b three layers(a.12)

XX-groupCytidine deaminase-like(2492)

HH-groupCytidine deaminase-like(2492.1)

TT-groupCytidine deaminase-like(2492.1.1)

FFamilyJAB(2492.1.1.2)

Pfam Families

JAB1/Mov34/MPN/PAD-1 ubiquitin protease

ClanCL0366JAB

External Links

ECOD PDB View: 6EF3 RCSB PDB: 6EF3 PDBe: 6EF3 UniProt: P43588

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure