ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6bb0A2 - ECOD Domain | ECOD

ECOD/Domains/e6bb0A2

e6bb0A2

UID: 002411682

PDB

Range: A:160-331
PDB: 6BB0 chain A(all domains)
UniProt: P00338 (all domains)
Gene: LDHA

Molecule: L-lactate dehydrogenase A chain

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ldh_1_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLDH C-terminal domain-like(279)

HH-groupLDH C-terminal domain-like(279.1)

TT-groupLDH C-terminal domain-like(279.1.1)

FFamilyLdh_1_C(279.1.1.1)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128
(6S)-3-[(2-chlorophenyl)sulfanyl]-4-hydroxy-6-(2-hydroxyphenyl)-6-phenyl-5,6-dihydro-2H-pyran-2-oneD3S

+ 2 additives (Sulfate ion, HEPES)

Pfam Families

PF02866Ldh_1_C

lactate/malate dehydrogenase, alpha/beta C-terminal domain

ClanCL0341LDH_C

External Links

ECOD PDB View: 6BB0 RCSB PDB: 6BB0 PDBe: 6BB0 UniProt: P00338

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ion

DrugBank DB14546

HEPESEPE

DrugBank DB16872within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.