ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6bb3A1 - ECOD Domain | ECOD

ECOD/Domains/e6bb3A1

e6bb3A1

UID: 002411721

PDB

Range: A:160-331
PDB: 6BB3 chain A(all domains)
UniProt: P00338 (all domains)
Gene: LDHA

Molecule: L-lactate dehydrogenase A chain

3D Structure

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Related Domains

Browse other domains in Ldh_1_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLDH C-terminal domain-like(279)

HH-groupLDH C-terminal domain-like(279.1)

TT-groupLDH C-terminal domain-like(279.1.1)

FFamilyLdh_1_C(279.1.1.1)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128
(6R)-3-[(2-chlorophenyl)sulfanyl]-6-{6-[(4-fluorophenyl)amino]pyridin-2-yl}-4-hydroxy-6-(thiophen-3-yl)-5,6-dihydro-2H-pyran-2-oneD4A

+ 1 additive (Sulfate ion)

Pfam Families

PF02866Ldh_1_C

lactate/malate dehydrogenase, alpha/beta C-terminal domain

ClanCL0341LDH_C

External Links

ECOD PDB View: 6BB3 RCSB PDB: 6BB3 PDBe: 6BB3 UniProt: P00338

Downloads

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Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.