ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6hjgA1 - ECOD Domain | ECOD

ECOD/Domains/e6hjgA1

e6hjgA1

UID: 002414996

PDB

Range: A:38-197
PDB: 6HJG chain A(all domains)
UniProt: Q4DA80 (all domains)
Gene: PA45-A

Molecule: Proline racemase A

3D Structure

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Related Domains

Browse other domains in Pro_racemase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupDiaminopimelate epimerase-like(286)

HH-groupDiaminopimelate epimerase-like(286.1)

TT-groupDiaminopimelate epimerase-like(286.1.1)

FFamilyPro_racemase(286.1.1.4)

Ligands

in contact, ≤ 4 Å

Laevulinic AcidSHF
drugDrugBank DB02239

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523within 5 Å only

Pfam Families

PF05544Pro_racemase

Proline racemase

ClanCL0288DAP_epimerase

External Links

ECOD PDB View: 6HJG RCSB PDB: 6HJG PDBe: 6HJG UniProt: Q4DA80

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.