ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mj7A1 - ECOD Domain | ECOD

ECOD/Domains/e6mj7A1

e6mj7A1

UID: 002415503

PDB

Range: A:118-171
PDB: 6MJ7 chain A(all domains)
UniProt: Q13501 (all domains)
Gene: SQSTM1

Molecule: Sequestosome-1

3D Structure

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Related Domains

Browse other domains in ZZ →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyZZ(376.1.1.3)

Ligands

in contact, ≤ 4 Å

ArginineARG
drugDrugBank DB00125
Zinc ionZN
metal

+ 1 additive (1,4-Dioxane)

Pfam Families

Zinc finger, ZZ type

ClanCL0229RING

External Links

ECOD PDB View: 6MJ7 RCSB PDB: 6MJ7 PDBe: 6MJ7 UniProt: Q13501

Downloads

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1,4-Dioxane

DrugBank DB03316

Shown in the structure viewer. Drug annotations from DrugDomain.