ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mkgA5 - ECOD Domain | ECOD

ECOD/Domains/e6mkgA5

e6mkgA5

UID: 002415525

PDB

Range: A:39-160
PDB: 6MKG chain A(all domains)
UniProt: A0A075Q0W3 (all domains)
Gene: pbp5

Molecule: penicillin binding protein 5 (PBP5)

3D Structure

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Related Domains

Browse other domains in MecA_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCystatin-like(243)

HH-groupNTF2-like(243.1)

TT-groupNTF2-like(243.1.1)

FFamilyMecA_N(243.1.1.7)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

NTF2-like N-terminal transpeptidase domain

ClanCL0051NTF2

External Links

ECOD PDB View: 6MKG RCSB PDB: 6MKG PDBe: 6MKG UniProt: A0A075Q0W3

Downloads

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