ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yjdB1 - ECOD Domain | ECOD

ECOD/Domains/e5yjdB1

e5yjdB1

UID: 002417241

PDB

Range: B:3-216
PDB: 5YJD chain B(all domains)
UniProt: Q5HK91 (all domains)
Gene: SERP2459

Molecule: CRISPR system Cms endoribonuclease Csm3 (CRISPR type III A-associated RAMP protein Csm3)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCas7-related(304.139)

TT-groupCRISPR-associated protein Cas7/Csa2-related(304.139.1)

FFamilyRAMPs(304.139.1.2)

Pfam Families

RAMP superfamily

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 5YJD RCSB PDB: 5YJD PDBe: 5YJD UniProt: Q5HK91

Downloads

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