ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kk5A3 - ECOD Domain | ECOD

ECOD/Domains/e5kk5A3

e5kk5A3

UID: 002417947

PDB

Range: A:1073-1258
PDB: 5KK5 chain A(all domains)
UniProt: U2UMQ6 (all domains)
Gene: cas12a

Molecule: CRISPR-associated endonuclease Cas12a (EC 3.1.21.1) (EC 4.6.1.22) (AsCpf1) (CRISPR-associated endonuclease Cpf1)

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCRISPR-associated endonuclease Cpf1 nuclease domain(1068)

HH-groupCRISPR-associated endonuclease Cpf1 nuclease domain(1068.1)

TT-groupCRISPR-associated endonuclease Cpf1 nuclease domain(1068.1.1)

FFamilyNUC(1068.1.1.1)

Pfam Families

Nuclease domain

External Links

ECOD PDB View: 5KK5 RCSB PDB: 5KK5 PDBe: 5KK5 UniProt: U2UMQ6

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