ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6eykA4 - ECOD Domain | ECOD

ECOD/Domains/e6eykA4

e6eykA4

UID: 002420465

PDB

Range: A:1-118
PDB: 6EYK chain A(all domains)
UniProt: P16581 (all domains)
Gene: SELE

Molecule: E-selectin

3D Structure

Loading viewer...

Related Domains

Browse other domains in Lectin_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupC-type lectin-like(209)

HH-groupC-type lectin-like(209.1)

TT-groupC-type lectin-like(209.1.1)

FFamilyLectin_C(209.1.1.1)

Ligands

in contact, ≤ 4 Å

(2~{S})-3-cyclohexyl-2-[(2~{R},3~{S},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-6-[(1~{R},2~{R},3~{S})-3-methyl-2-[(2~{R},3~{S},4~{R},5~{S},6~{R})-3,4,5-tris(oxidanyl)-6-(trifluoromethyl)oxan-2-yl]oxy-cyclohexyl]oxy-3,5-bis(oxidanyl)oxan-4-yl]oxy-propanoic acidC5K
Calcium ionCA
metal
2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

Pfam Families

PF00059Lectin_C

Lectin C-type domain

ClanCL0056C_Lectin

External Links

ECOD PDB View: 6EYK RCSB PDB: 6EYK PDBe: 6EYK UniProt: P16581

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.