ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ysuA1 - ECOD Domain | ECOD

ECOD/Domains/e5ysuA1

e5ysuA1

UID: 002420735

PDB

Range: A:9-216
PDB: 5YSU chain A(all domains)
UniProt: P62826 (all domains)
Gene: RAN

Molecule: GTP-binding nuclear protein Ran

3D Structure

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Related Domains

Browse other domains in Ras →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRas(2004.1.1.19)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
Chloride ionCL
Magnesium ionMG

Pfam Families

Ras family

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5YSU RCSB PDB: 5YSU PDBe: 5YSU UniProt: P62826

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (Nitrate)

NitrateNO3
DrugBank DB14049

Shown in the structure viewer. Drug annotations from DrugDomain.