ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ytuB1 - ECOD Domain | ECOD

ECOD/Domains/e5ytuB1

e5ytuB1

UID: 002420787

PDB

Range: B:0-153
PDB: 5YTU chain B(all domains)
UniProt: P00441 (all domains)
Gene: SOD1

Molecule: Superoxide dismutase [Cu-Zn]

3D Structure

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Related Domains

Browse other domains in Sod_Cu →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupCu,Zn superoxide dismutase-like(11.1.3)

FFamilySod_Cu(11.1.3.1)

Ligands

in contact, ≤ 4 Å

Dihydrogen tetrasulfideS4P
Zinc ionZN
metal

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

Copper/zinc superoxide dismutase (SODC)

External Links

ECOD PDB View: 5YTU RCSB PDB: 5YTU PDBe: 5YTU UniProt: P00441

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.