ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5yulB1 - ECOD Domain | ECOD

ECOD/Domains/e5yulB1

e5yulB1

UID: 002420797

PDB

Range: B:0-153
PDB: 5YUL chain B(all domains)
UniProt: P00441 (all domains)
Gene: SOD1

Molecule: Superoxide dismutase [Cu-Zn]

3D Structure

Loading viewer...

Related Domains

Browse other domains in Sod_Cu →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupCu,Zn superoxide dismutase-like(11.1.3)

FFamilySod_Cu(11.1.3.1)

Ligands

in contact, ≤ 4 Å

Dihydrogen tetrasulfideS4P
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Copper/zinc superoxide dismutase (SODC)

External Links

ECOD PDB View: 5YUL RCSB PDB: 5YUL PDBe: 5YUL UniProt: P00441

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure