ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5vatB2 - ECOD Domain | ECOD

ECOD/Domains/e5vatB2

e5vatB2

UID: 002427449

PDB

Range: B:361-488
PDB: 5VAT chain B(all domains)
UniProt: P45299 (all domains)
Gene: lpoA

Molecule: Penicillin-binding protein activator LpoA (PBP activator LpoA)

3D Structure

Loading viewer...

Related Domains

Browse other domains in LppC →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyLppC(2007.1.2.7)

Pfam Families

LppC putative lipoprotein

ClanCL0144Periplas_BP

External Links

ECOD PDB View: 5VAT RCSB PDB: 5VAT PDBe: 5VAT UniProt: P45299

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure