ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5un1E3 - ECOD Domain | ECOD

ECOD/Domains/e5un1E3

e5un1E3

UID: 002427497

PDB

Range: E:548-645,E:795-820
PDB: 5UN1 chain E(all domains)
UniProt: A0A1L8F5J9 (all domains)
Gene: grin1

Molecule: N-methyl-D-aspartate receptor subunit NR1-3a

3D Structure

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Related Domains

Browse other domains in Lig_chan →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyLig_chan(5054.1.1.1)

Ligands

in contact, ≤ 4 Å

Glutamic acidGLU
drugDrugBank DB00142within 5 Å only
(5S,10R)-5-methyl-10,11-dihydro-5H-5,10-epiminodibenzo[a,d][7]annuleneBMK

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00060Lig_chan

Ligand-gated ion channel

ClanCL0030Ion_channel

External Links

ECOD PDB View: 5UN1 RCSB PDB: 5UN1 PDBe: 5UN1 UniProt: A0A1L8F5J9

Downloads

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