ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6musE1 - ECOD Domain | ECOD

ECOD/Domains/e6musE1

e6musE1

UID: 002428762

PDB

Range: E:2-205
PDB: 6MUS chain E(all domains)
UniProt: B6YWC1 (all domains)
Gene: csm4

Molecule: CRISPR system Cms protein Csm4 (CRISPR type III A-associated RAMP protein Csm4)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51)

TT-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51.1)

FFamilyRAMPs(304.51.1.2)

Pfam Families

RAMP superfamily

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 6MUS RCSB PDB: 6MUS PDBe: 6MUS UniProt: B6YWC1

Downloads

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