ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6a9aA1 - ECOD Domain | ECOD

ECOD/Domains/e6a9aA1

e6a9aA1

UID: 002429656

PDB

Range: A:1-246
PDB: 6A9A chain A(all domains)
UniProt: P08773 (all domains)
Gene: 42

Molecule: Deoxycytidylate 5-hydroxymethyltransferase

3D Structure

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Related Domains

Browse other domains in Thymidylat_synt →

Classification

AArchitecturea+b two layers(a.11)

XX-groupThymidylate synthase/dCMP hydroxymethylase(266)

HH-groupThymidylate synthase/dCMP hydroxymethylase(266.1)

TT-groupThymidylate synthase/dCMP hydroxymethylase(266.1.1)

FFamilyThymidylat_synt(266.1.1.1)

Ligands

in contact, ≤ 4 Å

2'-Deoxycytidine-5'-MonophosphateDCM
drugDrugBank DB03798
(6S)-5,6,7,8-tetrahydrofolic acidTHG
drugDrugBank DB02031

Pfam Families

PF00303Thymidylat_synt

Thymidylate synthase

External Links

ECOD PDB View: 6A9A RCSB PDB: 6A9A PDBe: 6A9A UniProt: P08773

Downloads

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Iodide ionIOD

Shown in the structure viewer. Drug annotations from DrugDomain.