ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6e39Ak1 - ECOD Domain | ECOD

ECOD/Domains/e6e39Ak1

e6e39Ak1

UID: 002431788

PDB

Range: Ak:43-231
PDB: 6E39 chain Ak(all domains)
UniProt: Q805N7 (all domains)
Gene: cap

Molecule: Cap (Cap protein) (Capsid) (Putative capsid protein)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Circo_capsid →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyCirco_capsid(10.2.1.29)

Pfam Families

PF02443Circo_capsid

Circovirus capsid protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 6E39 RCSB PDB: 6E39 PDBe: 6E39 UniProt: Q805N7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure