ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6gtdA2 - ECOD Domain | ECOD

ECOD/Domains/e6gtdA2

e6gtdA2

UID: 002432017

PDB

Range: A:660-762
PDB: 6GTD chain A(all domains)
UniProt: A0Q7Q2 (all domains)
Gene: cas12a

Molecule: CRISPR-associated endonuclease Cas12a (EC 3.1.21.1) (EC 4.6.1.22) (CRISPR-associated endonuclease Cpf1) (FnCas12a) (FnCpf1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cpf1_PI-like →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain(1069)

HH-groupCRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain(1069.1)

TT-groupCRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain(1069.1.1)

FFamilyCpf1_PI-like(1069.1.1.1)

Pfam Families

PF22222Cpf1_PI-like

CRISPR-associated endonuclease Cpf1 PI domain

External Links

ECOD PDB View: 6GTD RCSB PDB: 6GTD PDBe: 6GTD UniProt: A0Q7Q2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure