ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6aq4A1 - ECOD Domain | ECOD

ECOD/Domains/e6aq4A1

e6aq4A1

UID: 002440668

PDB

Range: A:10-276
PDB: 6AQ4 chain A(all domains)
UniProt: P9WPE1 (all domains)
Gene: citE

Molecule: Citrate lyase subunit beta-like protein

3D Structure

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Related Domains

Browse other domains in HpcH_HpaI, C-C_Bond_Lyase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyHpcH_HpaI, C-C_Bond_Lyase(2002.1.1.300)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Citramalyl-CoACQM
Magnesium ionMG
metal

Pfam Families

PF03328HpcH_HpaI

HpcH/HpaI aldolase/citrate lyase

ClanCL0036TIM_barrel

PF15617C-C_Bond_Lyase

C-C_Bond_Lyase of the TIM-Barrel fold

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6AQ4 RCSB PDB: 6AQ4 PDBe: 6AQ4 UniProt: P9WPE1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.