ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gsiC1 - ECOD Domain | ECOD

ECOD/Domains/e6gsiC1

e6gsiC1

UID: 002441064

PDB

Range: C:130-328
PDB: 6GSI chain C(all domains)
UniProt: P27406 (all domains)
Gene: CPP76

Molecule: Capsid protein VP1 (CP) (Coat protein) (Protein 73 kDa) [Cleaved into: Capsid leader protein (LC) (Protein 14 kDa); Mature capsid protein (Protein 59 kDa); Protein 40k (p40)]

3D Structure

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Related Domains

Browse other domains in Calici_coat →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyCalici_coat(10.2.1.13)

Pfam Families

PF00915Calici_coat

Calicivirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 6GSI RCSB PDB: 6GSI PDBe: 6GSI UniProt: P27406

Downloads

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