ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6i1kA3 - ECOD Domain | ECOD

ECOD/Domains/e6i1kA3

e6i1kA3

UID: 002442059

PDB

Range: A:339-589
PDB: 6I1K chain A(all domains)
UniProt: A0Q7Q2 (all domains)
Gene: cas12a

Molecule: CRISPR-associated endonuclease Cas12a (EC 3.1.21.1) (EC 4.6.1.22) (CRISPR-associated endonuclease Cpf1) (FnCas12a) (FnCpf1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in cas_Cpf1_2nd →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupCRISPR-associated endonuclease Cpf1 second helical domain(1071)

HH-groupCRISPR-associated endonuclease Cpf1 second helical domain(1071.1)

TT-groupCRISPR-associated endonuclease Cpf1 second helical domain(1071.1.1)

FFamilycas_Cpf1_2nd(1071.1.1.1)

Pfam Families

PF21918cas_Cpf1_2nd

CRISPR-associated endonuclease Cpf1 REC2 domain

External Links

ECOD PDB View: 6I1K RCSB PDB: 6I1K PDBe: 6I1K UniProt: A0Q7Q2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure