ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6hwaY1 - ECOD Domain | ECOD

ECOD/Domains/e6hwaY1

e6hwaY1

UID: 002446502

PDB

Range: Y:1-212
PDB: 6HWA chain Y(all domains)
UniProt: P30656 (all domains)
Gene: PRE2

Molecule: Proteasome subunit beta type-5

3D Structure

Loading viewer...

Related Domains

Browse other domains in Proteasome →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome(210.1.1.1)

Ligands

in contact, ≤ 4 Å

(2~{S})-~{N}-[(2~{S},3~{R})-1-[(4~{a}~{S},8~{a}~{S})-1,2,3,4,4~{a},5,6,7,8,8~{a}-decahydronaphthalen-2-yl]-4-methyl-3,4-bis(oxidanyl)pentan-2-yl]-3-(4-methoxyphenyl)-2-[[(2~{S})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamideGVW
Magnesium ionMG
metal

+ 1 additive (2-(N-morpholino)ethanesulfonic acid)

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

External Links

ECOD PDB View: 6HWA RCSB PDB: 6HWA PDBe: 6HWA UniProt: P30656

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814

Shown in the structure viewer. Drug annotations from DrugDomain.