ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ithA1 - ECOD Domain | ECOD

ECOD/Domains/e6ithA1

e6ithA1

UID: 002452528

RepresentativePDB

Range: A:1-35
PDB: 6ITH chain A(all domains)
UniProt: P34741 (all domains)
Gene: SDC2

Molecule: Syndecan-2 (SYND2) (Fibroglycan) (Heparan sulfate proteoglycan core protein) (HSPG) (CD antigen CD362)

3D Structure

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Related Domains

Browse other domains in Syndecan →

Classification

AArchitectureextended segments(a.20)

XX-groupTransmembrane segment of lysosome-associated membrane glycoprotein 2(6169)

HH-groupTransmembrane segment of lysosome-associated membrane glycoprotein 2(6169.1)

TT-groupTransmembrane segment of lysosome-associated membrane glycoprotein 2(6169.1.1)

FFamilySyndecan(6169.1.1.2)

Pfam Families

PF01034Syndecan

Syndecan domain

External Links

ECOD PDB View: 6ITH RCSB PDB: 6ITH PDBe: 6ITH UniProt: P34741

Downloads

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