ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6qemC2 - ECOD Domain | ECOD

ECOD/Domains/e6qemC2

e6qemC2

UID: 002455527

PDB

Range: C:190-468
PDB: 6QEM chain C(all domains)
UniProt: P0ACB0 (all domains)
Gene: dnaB

Molecule: Replicative DNA helicase

3D Structure

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Related Domains

Browse other domains in DnaB_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDnaB_C(2004.1.1.107)

Ligands

in contact, ≤ 4 Å

[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-tris(fluoranyl)beryllium08T
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

DnaB-like helicase C terminal domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6QEM RCSB PDB: 6QEM PDBe: 6QEM UniProt: P0ACB0

Downloads

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