ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6iybC1 - ECOD Domain | ECOD

ECOD/Domains/e6iybC1

e6iybC1

UID: 002459882

PDB

Range: C:7-178
PDB: 6IYB chain C(all domains)
UniProt: P51149 (all domains)
Gene: RAB7A

Molecule: Ras-related protein Rab-7a

3D Structure

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Related Domains

Browse other domains in Ras →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRas(2004.1.1.19)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ras family

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6IYB RCSB PDB: 6IYB PDBe: 6IYB UniProt: P51149

Downloads

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