ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ijjA1 - ECOD Domain | ECOD

ECOD/Domains/e6ijjA1

e6ijjA1

UID: 002460390

PDB

Range: A:415-751
PDB: 6IJJ chain A(all domains)
UniProt: P12154 (all domains)
Gene: psaA

Molecule: PsaA

3D Structure

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Related Domains

Browse other domains in PsaA_PsaB →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBacterial photosystem II reaction centre L and M subunits-like(5037)

HH-groupBacterial photosystem II reaction centre L and M subunits-like(5037.1)

TT-groupBacterial photosystem II reaction centre L and M subunits-like(5037.1.1)

FFamilyPsaA_PsaB(5037.1.1.2)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll ACLA
drugDrugBank DB02133
Phylloquinone

Pfam Families

PF00223PsaA_PsaB

Photosystem I psaA/psaB protein

External Links

ECOD PDB View: 6IJJ RCSB PDB: 6IJJ PDBe: 6IJJ UniProt: P12154

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB01022

1,2-Dipalmitoyl-Phosphatidyl-GlyceroleLHG

drugDrugBank DB02043within 5 Å only

Dodecyl-Alpha-D-MaltosideLMU

drugDrugBank DB03279within 5 Å only

Iron/sulfur clusterSF4

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.