ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ir7A1 - ECOD Domain | ECOD

ECOD/Domains/e6ir7A1

e6ir7A1

UID: 002468022

PDB

Range: A:4-237
PDB: 6IR7 chain A(all domains)
UniProt: P42212 (all domains)
Gene: GFP

Molecule: Green fluorescent protein

3D Structure

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Related Domains

Browse other domains in GFP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupGFP-like(271)

HH-groupGFP-like(271.1)

TT-groupGFP-like(271.1.1)

FFamilyGFP(271.1.1.1)

Ligands

in contact, ≤ 4 Å

6-hydroxynorleucineLDO
drugDrugBank DB03412

+ 2 additives (2-(N-morpholino)ethanesulfonic acid, Sulfate ion)

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814

Pfam Families

Green fluorescent protein

ClanCL0069GFP

External Links

ECOD PDB View: 6IR7 RCSB PDB: 6IR7 PDBe: 6IR7 UniProt: P42212

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.