ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6j0mA1 - ECOD Domain | ECOD

ECOD/Domains/e6j0mA1

e6j0mA1

UID: 002468517

PDB

Range: A:360-537
PDB: 6J0M chain A(all domains)
UniProt: B6VNN7 (all domains)
Gene: PAU_03346

Molecule: Gp5/Type VI secretion system Vgr protein OB-fold domain-containing protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Phage_base_V →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupTail-associated lysozyme gp5-N(2.7)

TT-groupTail-associated lysozyme gp5-N(2.7.1)

FFamilyPhage_base_V(2.7.1.1)

Pfam Families

PF04717Phage_base_V

Type VI secretion system/phage-baseplate injector OB domain

ClanCL0021OB

External Links

ECOD PDB View: 6J0M RCSB PDB: 6J0M PDBe: 6J0M UniProt: B6VNN7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure