ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6g0kB3 - ECOD Domain | ECOD

ECOD/Domains/e6g0kB3

e6g0kB3

UID: 002469774

PDB

Range: B:418-544
PDB: 6G0K chain B(all domains)
UniProt: Q47759 (all domains)
Gene: pbp5

Molecule: Low affinity penicillin-binding protein 5 (PBP5)

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyTranspeptidase(4019.1.1.3)

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 6G0K RCSB PDB: 6G0K PDBe: 6G0K UniProt: Q47759

Downloads

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