ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6qw65A5 - ECOD Domain | ECOD

ECOD/Domains/e6qw65A5

e6qw65A5

UID: 002471541

PDB

Range: 5A:1755-2016
PDB: 6QW6 chain 5A(all domains)
UniProt: Q6P2Q9 (all domains)
Gene: PRPF8

Molecule: Pre-mRNA-processing-splicing factor 8 (220 kDa U5 snRNP-specific protein) (PRP8 homolog) (Splicing factor Prp8) (p220)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PRP8_domainIV →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyPRP8_domainIV(2484.1.1.62)

Pfam Families

PF12134PRP8_domainIV

PRP8 domain IV core

ClanCL0219RNase_H

External Links

ECOD PDB View: 6QW6 RCSB PDB: 6QW6 PDBe: 6QW6 UniProt: Q6P2Q9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure