ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5a1yC6 - ECOD Domain | ECOD

ECOD/Domains/e5a1yC6

e5a1yC6

UID: 002473560

PDB

Range: C:1159-1225
PDB: 5A1Y chain C(all domains)
UniProt: Q8CIE6 (all domains)
Gene: Copa

Molecule: Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP) [Cleaved into: Xenin (Xenopsin-related peptide); Proxenin]

3D Structure

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Related Domains

Browse other domains in COPI_C →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyCOPI_C(376.1.1.11)

Pfam Families

Coatomer (COPI) alpha subunit C-terminus

ClanCL0020TPR

External Links

ECOD PDB View: 5A1Y RCSB PDB: 5A1Y PDBe: 5A1Y UniProt: Q8CIE6

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