ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1m54E2 - ECOD Domain | ECOD

ECOD/Domains/e1m54E2

e1m54E2

UID: 002483275

PDB

Range: E:232-397
PDB: 1M54 chain E(all domains)
UniProt: P35520 (all domains)
Gene: CBS

Molecule: CYSTATHIONINE BETA-SYNTHASE

3D Structure

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Related Domains

Browse other domains in PALP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4)

TT-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4.1)

FFamilyPALP(2003.4.1.1)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
Pyridoxal phosphatePLP
drugDrugBank DB00114

Shown in the structure viewer.

Pfam Families

Pyridoxal-phosphate dependent enzyme

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1M54 RCSB PDB: 1M54 PDBe: 1M54 UniProt: P35520

Downloads

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Drug annotations from DrugDomain.