ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vscB2 - ECOD Domain | ECOD

ECOD/Domains/e3vscB2

e3vscB2

UID: 002483681

PDB

Range: B:97-230
PDB: 3VSC chain B(all domains)
UniProt: Q9YBL2 (all domains)
Gene: cysO

Molecule: Protein CysO

3D Structure

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Related Domains

Browse other domains in PALP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4)

TT-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4.1)

FFamilyPALP(2003.4.1.1)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114
DexfosfoserineSEP
drugDrugBank DB04522

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

Pfam Families

Pyridoxal-phosphate dependent enzyme

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3VSC RCSB PDB: 3VSC PDBe: 3VSC UniProt: Q9YBL2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.