ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6e9pD2 - ECOD Domain | ECOD

ECOD/Domains/e6e9pD2

e6e9pD2

UID: 002484815

PDB

Range: D:5-214
PDB: 6E9P chain D(all domains)
UniProt: P9WFX9 (all domains)
Gene: trpB

Molecule: Tryptophan synthase beta chain

3D Structure

Loading viewer...

Related Domains

Browse other domains in PALP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4)

TT-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4.1)

FFamilyPALP(2003.4.1.1)

Ligands

in contact, ≤ 4 Å

(2R,3S,4R)-3-(2',6'-difluoro-4'-methyl[1,1'-biphenyl]-4-yl)-4-(fluoromethyl)azetidine-2-carbonitrileHDJ

+ 2 additives (Formic acid, 1,2-ETHANEDIOL)

Formic acidFMT
DrugBank DB01942
1,2-ETHANEDIOL

Pfam Families

Pyridoxal-phosphate dependent enzyme

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6E9P RCSB PDB: 6E9P PDBe: 6E9P UniProt: P9WFX9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.