ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5on3A2 - ECOD Domain | ECOD

ECOD/Domains/e5on3A2

e5on3A2

UID: 002486692

PDB

Range: A:226-415
PDB: 5ON3 chain A(all domains)
UniProt: P07813 (all domains)
Gene: leuS

Molecule: Leucine--tRNA ligase

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilytRNA-synt_1_2(1.1.1.7)

Ligands

in contact, ≤ 4 Å

(2~{S})-~{N}-[(2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-(hydroxymethyl)-4-oxidanyl-oxolan-3-yl]-2-azanyl-4-methyl-pentanamide9YN

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13603tRNA-synt_1_2

Leucyl-tRNA synthetase, editing domain

ClanCL0039HUP

External Links

ECOD PDB View: 5ON3 RCSB PDB: 5ON3 PDBe: 5ON3 UniProt: P07813

Downloads

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