ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1pj4B1 - ECOD Domain | ECOD

ECOD/Domains/e1pj4B1

e1pj4B1

UID: 002503820

PDB

Range: B:1022-1279
PDB: 1PJ4 chain B(all domains)
UniProt: P23368 (all domains)
Gene: ME2

Molecule: NAD-dependent malic enzyme, mitochondrial

3D Structure

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Related Domains

Browse other domains in malic →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupAminoacid dehydrogenase-like, N-terminal domain(2007.1.6)

FFamilymalic(2007.1.6.1)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Fumaric acidFUM
drugDrugBank DB01677
MANGANESE (II) ION

Pfam Families

Malic enzyme, N-terminal domain

ClanCL0603AA_dh_N

External Links

ECOD PDB View: 1PJ4 RCSB PDB: 1PJ4 PDBe: 1PJ4 UniProt: P23368

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (D-Malic acid)

D-Malic acidMLT
DrugBank DB03499

Shown in the structure viewer. Drug annotations from DrugDomain.