ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6o83B1 - ECOD Domain | ECOD

ECOD/Domains/e6o83B1

e6o83B1

UID: 002505057

PDB

Range: B:1-75
PDB: 6O83 chain B(all domains)
UniProt: P0CH07 (all domains)
Gene: uep1

Molecule: Ubiquitin-ribosomal protein eL40B fusion protein [Cleaved into: Ubiquitin; Large ribosomal subunit protein eL40B (60S ribosomal protein L40) (CEP52)]

3D Structure

Loading viewer...

Related Domains

Browse other domains in ubiquitin →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyubiquitin(221.1.1.2)

Pfam Families

PF00240ubiquitin

Ubiquitin family

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 6O83 RCSB PDB: 6O83 PDBe: 6O83 UniProt: P0CH07

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure