ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6otfB2 - ECOD Domain | ECOD

ECOD/Domains/e6otfB2

e6otfB2

UID: 002505849

PDB

Range: B:214-262,B:411-521
PDB: 6OTF chain B(all domains)
UniProt: Q80RD6 (all domains)
Gene: ORF2

Molecule: Viral protein 1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Calici_coat_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupCapsid protein protrusion (P) domain(1.2)

TT-groupCapsid protein protrusion (P) domain(1.2.1)

FFamilyCalici_coat_C(1.2.1.2)

Pfam Families

PF08435Calici_coat_C

Calicivirus coat protein C-terminal

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 6OTF RCSB PDB: 6OTF PDBe: 6OTF UniProt: Q80RD6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure